MLOC_28393 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.439323.393422.642652.83976
LEAShoots from the seedlings (10 cm shoot stage)2.776023.080693.073892.24629
INF1Young developing inflorescences (5mm)8.838349.0640310.11646.7069
INF2Developing inflorescences (1-1.5 cm)11.494910.3079.201789.85901
ROORoots from the seedlings (10 cm shoot stage)0.826943.345362.219972.83097
NODDeveloping tillers at six leaf stage, 3rd internode2.080312.432083.949237.44983
CAR5Developing grain, bracts removed (5 DPA)4.231763.0923.645852.92842
CAR15Developing grain, bracts removed (15 DPA)1.507571.093050.6920922.46975



CDS Structure of MLOC_28393






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28393.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28393.2NoneAvailableAvailablecontig_1913456 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g10190.1 +3 4e-23 99 46/70 (66%) 13110.m00915 protein ATP-binding region, ATPase-like domain containing protein, expressed
TAIR PP10None-----