- Predicted Gene MLOC_28316
MLOC_28316 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 796.669 | 649.383 | 770.011 | 841.235 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 417.089 | 344.974 | 354.629 | 356.998 |
| INF1 | Young developing inflorescences (5mm) | 171.572 | 182.852 | 169.699 | 169.486 |
| INF2 | Developing inflorescences (1-1.5 cm) | 142.675 | 156.999 | 174.172 | 195.981 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 891.199 | 596.004 | 841.948 | 972.084 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1198.85 | 429.16 | 342.783 | 1563.33 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 269.899 | 300.952 | 260.762 | 318.866 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 49.6602 | 53.6885 | 44.5224 | 135.671 |
CDS Structure of MLOC_28316
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28316.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g51270.2 |
-2 |
9e-28 |
105 |
97/110 (88%) |
13104.m05222 protein vacuolar ATPase G subunit, putative, expressed |
| TAIR PP10 |
AT3G01390.2 |
-2 |
4e-23 |
92 |
45/59 (76%) |
| Symbols: VMA10, AVMA10 | vacuolar membrane ATPase 10 | chr3:150265-150922 REVERSE LENGTH=110 |