- Predicted Gene MLOC_28314
MLOC_28314 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.819395 | 1.10475 | 0.225189 | 0.898094 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.128683 | 0.432154 | 0 | 0.29213 |
INF1 | Young developing inflorescences (5mm) | 0.325008 | 0.361082 | 0.25569 | 0.284709 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.133499 | 0.311548 | 0.245172 | 0.269753 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.17054 | 0.254167 | 1.36732 | 0.452352 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.365825 | 0.18592 | 0.264438 | 0.54516 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.380334 | 0.423877 | 0.549461 | 0.543846 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.273289 | 0.226001 | 0.0992988 | 0.581641 |
CDS Structure of MLOC_28314
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28314.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g35540.1 |
+3 |
9e-15 |
74 |
41/73 (56%) |
13106.m03669 protein aminotransferase, classes I and II, domain containing protein, expressed |
TAIR PP10 |
AT2G30970.2 |
+3 |
3e-11 |
62 |
35/64 (55%) |
| Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430 |