MLOC_28314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8193951.104750.2251890.898094
LEAShoots from the seedlings (10 cm shoot stage)0.1286830.43215400.29213
INF1Young developing inflorescences (5mm)0.3250080.3610820.255690.284709
INF2Developing inflorescences (1-1.5 cm)0.1334990.3115480.2451720.269753
ROORoots from the seedlings (10 cm shoot stage)0.170540.2541671.367320.452352
NODDeveloping tillers at six leaf stage, 3rd internode0.3658250.185920.2644380.54516
CAR5Developing grain, bracts removed (5 DPA)0.3803340.4238770.5494610.543846
CAR15Developing grain, bracts removed (15 DPA)0.2732890.2260010.09929880.581641



CDS Structure of MLOC_28314






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28314.1CUST_4065_PI427708083AvailableAvailablecontig_190822 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35540.1 +3 9e-15 74 41/73 (56%) 13106.m03669 protein aminotransferase, classes I and II, domain containing protein, expressed
TAIR PP10 AT2G30970.2 +3 3e-11 62 35/64 (55%) | Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430