- Predicted Gene MLOC_28275
MLOC_28275 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.6762 | 7.80989 | 7.54146 | 4.93802 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.21195 | 11.6509 | 9.53136 | 4.76397 |
| INF1 | Young developing inflorescences (5mm) | 10.8081 | 13.1854 | 16.0507 | 6.68731 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.29 | 12.9906 | 13.6138 | 9.93973 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.54506 | 5.22657 | 5.17631 | 3.49089 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.15689 | 3.88851 | 5.83525 | 9.40308 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.12734 | 6.07636 | 6.64626 | 4.11921 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.08456 | 4.22621 | 5.42636 | 6.36349 |
CDS Structure of MLOC_28275
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28275.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g12780.1 |
+2 |
3e-26 |
110 |
52/62 (84%) |
13106.m01404 protein OsDegp10 - Putative Deg protease homologue, expressed |
| TAIR PP10 |
AT5G40200.1 |
+2 |
4e-23 |
100 |
47/62 (76%) |
| Symbols: DegP9 | DegP protease 9 | chr5:16070402-16073101 FORWARD LENGTH=592 |