MLOC_28251 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.464410.672415.285111.948
LEAShoots from the seedlings (10 cm shoot stage)21.736114.852516.761616.0375
INF1Young developing inflorescences (5mm)25.591937.448442.836427.557
INF2Developing inflorescences (1-1.5 cm)33.105432.861932.669134.6193
ROORoots from the seedlings (10 cm shoot stage)8.437049.705279.8584112.0983
NODDeveloping tillers at six leaf stage, 3rd internode11.200821.051312.196668.8187
CAR5Developing grain, bracts removed (5 DPA)19.901621.815519.791919.2591
CAR15Developing grain, bracts removed (15 DPA)3.831352.042914.630577.26464



CDS Structure of MLOC_28251






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28251.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28251.1NoneAvailableAvailablecontig_190344 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02000.1 +1 3e-14 74 40/91 (44%) 13108.m00133 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----