MLOC_2825 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)000.3624310.377573
INF1Young developing inflorescences (5mm)0.096902600.1207280.186269
INF2Developing inflorescences (1-1.5 cm)0.0909898000.112614
ROORoots from the seedlings (10 cm shoot stage)0.2044480.12190100.304465
NODDeveloping tillers at six leaf stage, 3rd internode00.09867440.06465390.494812
CAR5Developing grain, bracts removed (5 DPA)0.32550.5027250.5587620.525022
CAR15Developing grain, bracts removed (15 DPA)0.0940293000.340727



CDS Structure of MLOC_2825






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2825.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2825.1CUST_4054_PI427708083AvailableAvailablecontig_125097 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60790.1 -2 1e-29 112 63/124 (51%) 13103.m06678 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT5G59610.2 -2 4e-27 103 46/64 (72%) Chaperone DnaJ-domain superfamily protein | chr5:24013165-24014889 FORWARD LENGTH=256