MLOC_28220 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.179693.820232.585633.30815
LEAShoots from the seedlings (10 cm shoot stage)3.043432.049292.922442.55575
INF1Young developing inflorescences (5mm)3.908594.325176.148743.9652
INF2Developing inflorescences (1-1.5 cm)5.230653.95693.893935.0441
ROORoots from the seedlings (10 cm shoot stage)0.7271072.073272.668392.47292
NODDeveloping tillers at six leaf stage, 3rd internode2.052922.367072.114927.64339
CAR5Developing grain, bracts removed (5 DPA)1.862291.473021.993891.83748
CAR15Developing grain, bracts removed (15 DPA)1.277782.216681.265853.87828



CDS Structure of MLOC_28220






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK367942
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367942NoneNoneNoneNone
MLOC_1223.1NoneAvailableNonecontig_110544 (Mapped)
MLOC_28220.1NoneAvailableAvailablecontig_1900636 (Not mapped)
MLOC_29080.1NoneAvailableNonecontig_1972741 (Not mapped)
MLOC_46526.1NoneAvailableNonecontig_291675 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----