- Predicted Gene MLOC_28211
MLOC_28211 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28211_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28211_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.52002 | 2.08812 | 1.84454 | 2.0254 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.64169 | 2.7876 | 2.46868 | 2.01933 |
INF1 | Young developing inflorescences (5mm) | 3.51527 | 3.86876 | 4.4119 | 2.81007 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.42303 | 3.31855 | 2.64473 | 2.86223 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.50361 | 1.8122 | 1.61579 | 1.76001 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.36672 | 1.54774 | 1.6452 | 4.08067 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.81437 | 1.9738 | 1.94906 | 1.70703 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.444692 | 0.165022 | 0.273918 | 0.621432 |
CDS Structure of MLOC_28211
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28211.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g49670.2 |
-1 |
1e-55 |
199 |
102/133 (77%) |
13106.m05326 protein pentatricopeptide, putative, expressed |
TAIR PP10 |
AT5G42310.1 |
-1 |
9e-27 |
115 |
58/112 (52%) |
Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:16915860-16918238 FORWARD LENGTH=709 |