- Predicted Gene MLOC_28197
MLOC_28197 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28197_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28197_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.298025 | 0.609846 | 1.11636 | 0.707925 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.159554 | 0.151528 | 0.262485 |
INF1 | Young developing inflorescences (5mm) | 0.885331 | 1.45593 | 0.959222 | 1.03659 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.17212 | 1.60766 | 1.67671 | 2.15874 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.385073 | 0 | 1.28962 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.129844 | 0.267314 | 0.307469 | 0.885262 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.519412 | 0.960747 | 0.988863 | 0.937711 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.624156 | 0.509245 | 0.346029 | 1.31428 |
CDS Structure of MLOC_28197
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28197.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g02090.1 |
-3 |
9e-15 |
72 |
41/89 (46%) |
13110.m00108 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |