MLOC_28196 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.947552.007846.74870
LEAShoots from the seedlings (10 cm shoot stage)51.821917.752917.23930
INF1Young developing inflorescences (5mm)43.654342.135834.47870
INF2Developing inflorescences (1-1.5 cm)38.215632.824436.54820
ROORoots from the seedlings (10 cm shoot stage)29.002328.461224.74280
NODDeveloping tillers at six leaf stage, 3rd internode36.848428.415814.15770
CAR5Developing grain, bracts removed (5 DPA)51.38843.794743.97090
CAR15Developing grain, bracts removed (15 DPA)17.248513.095119.11050



CDS Structure of MLOC_28196






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364738
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364738CUST_24814_PI427708080NoneNoneNone
MLOC_10196.1NoneAvailableNonecontig_1558593 (Not mapped)
MLOC_1512.1NoneAvailableNonecontig_1134067 (Not mapped)
MLOC_16812.1NoneAvailableNonecontig_1574562 (Mapped)
MLOC_24961.1NoneAvailableNonecontig_1663475 (Not mapped)
MLOC_28196.1NoneAvailableNonecontig_1899359 (Not mapped)
MLOC_30444.1NoneAvailableNonecontig_2097479 (Mapped)
MLOC_30790.1NoneAvailableNonecontig_212689 (Mapped)
MLOC_31910.1NoneAvailableNonecontig_2233947 (Not mapped)
MLOC_32807.1NoneAvailableNonecontig_23213 (Not mapped)
MLOC_35009.1NoneAvailableNonecontig_24528 (Not mapped)
MLOC_48632.1NoneAvailableNonecontig_327062 (Mapped)
MLOC_53403.1NoneAvailableNonecontig_383308 (Not mapped)
MLOC_65315.1NoneAvailableAvailablecontig_500362 (Mapped)
MLOC_79615.1NoneAvailableNonecontig_85997 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----