- Predicted Gene MLOC_28188
MLOC_28188 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28188_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28188_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 1.49153 | 1.88819 | 2.08672 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.63444 | 0.5496 | 0 | 2.13984 |
INF1 | Young developing inflorescences (5mm) | 1.18098 | 1.18365 | 0.733032 | 1.27863 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.690362 | 1.25512 | 0.645638 | 0.995867 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.90148 | 0.643545 | 0 | 1.81731 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.07305 | 0.655009 | 0.0879434 | 1.91624 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.3119 | 0 | 0.985597 | 0.717377 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.448572 | 0.441749 |
CDS Structure of MLOC_28188
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28188.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g71200.1 |
-3 |
4e-23 |
94 |
45/49 (92%) |
13101.m07753 protein RNA recognition motif containing protein, putative, expressed |
TAIR PP10 |
AT1G03457.1 |
-3 |
2e-19 |
83 |
38/49 (78%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:861109-864019 REVERSE LENGTH=429 |