MLOC_28176 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.105791.440071.092131.15044
LEAShoots from the seedlings (10 cm shoot stage)0.4305170.45540800.350152
INF1Young developing inflorescences (5mm)1.663382.183644.519221.96707
INF2Developing inflorescences (1-1.5 cm)1.069473.029891.710382.20156
ROORoots from the seedlings (10 cm shoot stage)0.4478650.51736400.805539
NODDeveloping tillers at six leaf stage, 3rd internode0.2181840.2399831.507671.4594
CAR5Developing grain, bracts removed (5 DPA)1.150241.035871.273031.03615
CAR15Developing grain, bracts removed (15 DPA)0.2536960.266440.3735560.573212



CDS Structure of MLOC_28176






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28176.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28176.1CUST_11941_PI427708083AvailableAvailablecontig_189797 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72090.1 +3 7e-13 64 33/47 (70%) 13101.m07854 protein phycoerythrobilin ferredoxin oxidoreductase, putative, expressed
TAIR PP10None-----