MLOC_28175 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.818956.919552.13240
LEAShoots from the seedlings (10 cm shoot stage)33.288547.94762.10370
INF1Young developing inflorescences (5mm)58.95963.737676.0640
INF2Developing inflorescences (1-1.5 cm)65.450883.970253.09420
ROORoots from the seedlings (10 cm shoot stage)24.163448.406328.29910
NODDeveloping tillers at six leaf stage, 3rd internode22.304737.640325.24250
CAR5Developing grain, bracts removed (5 DPA)46.963146.144259.91430
CAR15Developing grain, bracts removed (15 DPA)47.78348.919443.67560



CDS Structure of MLOC_28175






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360084
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360084CUST_24291_PI427708080NoneNoneNone
MLOC_26120.1NoneAvailableNonecontig_1736973 (Not mapped)
MLOC_26276.1NoneAvailableNonecontig_174584 (Mapped)
MLOC_28175.1NoneAvailableNonecontig_1897748 (Not mapped)
MLOC_44466.1NoneAvailableNonecontig_27478 (Not mapped)
MLOC_46687.1NoneAvailableNonecontig_29425 (Mapped)
MLOC_48283.1NoneAvailableNonecontig_320622 (Not mapped)
MLOC_53046.1NoneAvailableNonecontig_380162 (Mapped)
MLOC_54800.1NoneAvailableNonecontig_394111 (Not mapped)
MLOC_78810.2NoneAvailableAvailablecontig_8200 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----