MLOC_28170 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.728352.104336.097150
LEAShoots from the seedlings (10 cm shoot stage)5.328976.446669.816610
INF1Young developing inflorescences (5mm)5.470264.713939.006110
INF2Developing inflorescences (1-1.5 cm)8.404765.020513.488660
ROORoots from the seedlings (10 cm shoot stage)3.75142.222314.549920
NODDeveloping tillers at six leaf stage, 3rd internode1.920436.162299.456790
CAR5Developing grain, bracts removed (5 DPA)3.574364.585122.832780
CAR15Developing grain, bracts removed (15 DPA)2.249712.031722.495480



CDS Structure of MLOC_28170






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251173.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251173.1CUST_23411_PI427708080NoneNoneNone
MLOC_28170.1NoneAvailableNonecontig_18974 (Not mapped)
MLOC_29830.1NoneAvailableNonecontig_2040928 (Not mapped)
MLOC_46796.1NoneAvailableNonecontig_295738 (Mapped)
MLOC_46807.1NoneAvailableAvailablecontig_295895 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----