MLOC_28157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.211390.9003121.444341.07464
LEAShoots from the seedlings (10 cm shoot stage)1.079961.331341.506511.05396
INF1Young developing inflorescences (5mm)0.3547660.2475080.2381960.234882
INF2Developing inflorescences (1-1.5 cm)0.7132020.6328410.510110.653737
ROORoots from the seedlings (10 cm shoot stage)0.6701410.6634640.4020190.727321
NODDeveloping tillers at six leaf stage, 3rd internode0.7770570.4489210.8111961.59873
CAR5Developing grain, bracts removed (5 DPA)1.277930.5826170.6626760.742543
CAR15Developing grain, bracts removed (15 DPA)3066.781577.231988.155234.8



CDS Structure of MLOC_28157






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28157.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375212NoneNoneNoneNone
MLOC_28157.1CUST_2087_PI427708080AvailableAvailablecontig_189620 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g31070.1 -2 4e-17 80 49/101 (49%) 13106.m03216 protein PROLM24 - Prolamin precursor, expressed
TAIR PP10None-----