MLOC_28154 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)01.13071.026430
INF1Young developing inflorescences (5mm)0.569021000
INF2Developing inflorescences (1-1.5 cm)0.423029000
ROORoots from the seedlings (10 cm shoot stage)00.67406800
NODDeveloping tillers at six leaf stage, 3rd internode0.5576631.004741.236680
CAR5Developing grain, bracts removed (5 DPA)1.0976300.6179520
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_28154






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248932.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248932.1NoneNoneNoneNone
MLOC_24345.1NoneAvailableAvailablecontig_164306 (Mapped)
MLOC_28154.1NoneAvailableNonecontig_1895847 (Mapped)
MLOC_3006.1NoneAvailableNonecontig_126998 (Mapped)
MLOC_32115.1NoneAvailableNonecontig_2253409 (Not mapped)
MLOC_33270.1NoneAvailableNonecontig_23588 (Not mapped)
MLOC_35409.1NoneAvailableNonecontig_2482301 (Not mapped)
MLOC_41906.1NoneAvailableNonecontig_2613025 (Not mapped)
MLOC_46271.1NoneAvailableNonecontig_287850 (Mapped)
MLOC_46358.3NoneAvailableNonecontig_289080 (Mapped)
MLOC_47425.1NoneAvailableNonecontig_305974 (Not mapped)
MLOC_48300.1NoneAvailableNonecontig_320894 (Not mapped)
MLOC_76694.1NoneAvailableNonecontig_724178 (Not mapped)
MLOC_79350.1NoneAvailableNonecontig_84556 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----