- Predicted Gene MLOC_28151
MLOC_28151 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.516318 | 0.457458 | 3.56184 | 1.23934 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.5015 | 0 | 0.687876 | 1.65813 |
INF1 | Young developing inflorescences (5mm) | 2.78867 | 8.62679 | 4.55033 | 4.5127 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.76219 | 4.21412 | 4.90363 | 4.97876 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.951285 | 3.21696 | 2.21397 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.391706 | 0.376583 | 1.23633 | 1.85972 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.55096 | 2.29765 | 1.62701 | 1.71154 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.459169 | 0.485041 | 0 | 1.44453 |
CDS Structure of MLOC_28151
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28151.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g62040.2 |
-1 |
5e-37 |
129 |
62/65 (95%) |
13101.m06633 protein ruvB-like, putative, expressed |
TAIR PP10 |
AT5G22330.1 |
-1 |
2e-34 |
122 |
59/65 (91%) |
| Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458 |