MLOC_28079 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.656215.096696.599930
LEAShoots from the seedlings (10 cm shoot stage)6.354322.520993.401340
INF1Young developing inflorescences (5mm)9.9327411.128313.17510
INF2Developing inflorescences (1-1.5 cm)11.381910.55559.445570
ROORoots from the seedlings (10 cm shoot stage)6.784868.050767.46750
NODDeveloping tillers at six leaf stage, 3rd internode9.457910.52496.427650
CAR5Developing grain, bracts removed (5 DPA)7.9195710.1527.986870
CAR15Developing grain, bracts removed (15 DPA)3.560652.479041.785910



CDS Structure of MLOC_28079






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248623.1CUST_18582_PI427708080NoneNoneNone
MLOC_26885.1NoneAvailableNonecontig_1787358 (Not mapped)
MLOC_28079.1NoneAvailableNonecontig_1889095 (Mapped)
MLOC_39522.1NoneAvailableNonecontig_2553743 (Mapped)
MLOC_69162.1NoneAvailableAvailablecontig_5601 (Mapped)
MLOC_7313.1NoneAvailableNonecontig_1389905 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----