- Predicted Gene MLOC_28057
MLOC_28057 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 144.845 | 97.7723 | 97.5957 | 140.733 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.8202 | 7.63248 | 17.5171 | 24.5802 |
INF1 | Young developing inflorescences (5mm) | 359.899 | 294.167 | 347.154 | 382.684 |
INF2 | Developing inflorescences (1-1.5 cm) | 192.054 | 349.45 | 315.683 | 443.612 |
ROO | Roots from the seedlings (10 cm shoot stage) | 107.006 | 82.5307 | 123.074 | 141.974 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.98844 | 6.56063 | 6.16796 | 20.7246 |
CAR5 | Developing grain, bracts removed (5 DPA) | 82.4124 | 92.7617 | 74.986 | 108.402 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.4163 | 8.90721 | 10.2738 | 31.0644 |
CDS Structure of MLOC_28057
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28057.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g39410.1 |
-1 |
2e-41 |
135 |
70/74 (95%) |
13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G59970.1 |
-1 |
8e-42 |
135 |
70/74 (95%) |
Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103 |