MLOC_28030 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09920920.08789930.3493650
LEAShoots from the seedlings (10 cm shoot stage)0.4144150.8174690.8306890
INF1Young developing inflorescences (5mm)0.4149570.5953720.8267580
INF2Developing inflorescences (1-1.5 cm)0.5112560.8533661.498980
ROORoots from the seedlings (10 cm shoot stage)00.1305960.4792080
NODDeveloping tillers at six leaf stage, 3rd internode0.6166550.9790211.103080
CAR5Developing grain, bracts removed (5 DPA)0.5211290.2868570.5620720
CAR15Developing grain, bracts removed (15 DPA)0.2490530.05031560.07372930



CDS Structure of MLOC_28030






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251184.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251184.1CUST_23413_PI427708080NoneNoneNone
MLOC_1300.1NoneAvailableAvailablecontig_111387 (Not mapped)
MLOC_28030.1NoneAvailableNonecontig_188432 (Mapped)
MLOC_28228.1NoneAvailableNonecontig_1901873 (Mapped)
MLOC_30501.1NoneAvailableNonecontig_210339 (Not mapped)
MLOC_74947.1NoneAvailableNonecontig_668236 (Not mapped)
MLOC_78727.1NoneAvailableNonecontig_816537 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----