MLOC_27943 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.466617.746818.051722.0497
LEAShoots from the seedlings (10 cm shoot stage)36.61218.249917.203821.7974
INF1Young developing inflorescences (5mm)54.942460.31266.363373.5691
INF2Developing inflorescences (1-1.5 cm)100.25299.0944100.321148.168
ROORoots from the seedlings (10 cm shoot stage)13.340228.836627.075740.2692
NODDeveloping tillers at six leaf stage, 3rd internode32.755114.29879.9932632.8555
CAR5Developing grain, bracts removed (5 DPA)52.921448.061640.12971.1376
CAR15Developing grain, bracts removed (15 DPA)29.430330.818732.531997.3231



CDS Structure of MLOC_27943






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27943.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27943.1CUST_2020_PI427708086AvailableAvailablecontig_1876082 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----