- Predicted Gene MLOC_27939
MLOC_27939 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27939_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27939_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.885487 | 0.342284 | 0.427952 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.238615 | 0 | 0.131045 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.155686 | 0 | 0.175549 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.226504 | 0.175177 | 0.544042 | 0.57867 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.384065 | 0 | 0.321891 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.737334 | 0.250476 | 0 | 1.44785 |
CDS Structure of MLOC_27939
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27939.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g27840.2 |
-2 |
4e-12 |
65 |
40/51 (78%) |
13108.m02871 protein phosphoenolpyruvate carboxylase, putative, expressed |
TAIR PP10 |
AT3G14940.1 |
-2 |
3e-12 |
64 |
40/51 (78%) |
| Symbols: ATPPC3, PPC3 | phosphoenolpyruvate carboxylase 3 | chr3:5025584-5029476 FORWARD LENGTH=968 |