MLOC_27889 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains239.204179.047203.694182.456
LEAShoots from the seedlings (10 cm shoot stage)195.288202.085213.527161.62
INF1Young developing inflorescences (5mm)154.351182.208194.479129.49
INF2Developing inflorescences (1-1.5 cm)99.6026124.448122.012112.195
ROORoots from the seedlings (10 cm shoot stage)411.056329.158376.097389.614
NODDeveloping tillers at six leaf stage, 3rd internode295.309259.567151.8766.631
CAR5Developing grain, bracts removed (5 DPA)122.382122.567122.511106.792
CAR15Developing grain, bracts removed (15 DPA)58.816453.660650.6621112.64



CDS Structure of MLOC_27889






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251556.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251556.1CUST_19033_PI427708080NoneNoneNone
MLOC_27889.1NoneAvailableAvailablecontig_187096 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----