MLOC_27861 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.052252.75352.423073.2927
LEAShoots from the seedlings (10 cm shoot stage)2.27910.8304530.576431.1873
INF1Young developing inflorescences (5mm)4.031532.304712.872333.47272
INF2Developing inflorescences (1-1.5 cm)4.371463.022645.217796.2942
ROORoots from the seedlings (10 cm shoot stage)1.004261.935654.250873.53615
NODDeveloping tillers at six leaf stage, 3rd internode4.764422.927163.8496710.5283
CAR5Developing grain, bracts removed (5 DPA)5.238845.633675.735228.1769
CAR15Developing grain, bracts removed (15 DPA)1.382140.9781480.9370313.5712



CDS Structure of MLOC_27861






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27861.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27861.1CUST_4006_PI427708083AvailableAvailablecontig_186925 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58880.1 -1 3e-23 96 49/57 (86%) 13104.m06204 protein exo70 exocyst complex subunit, putative, expressed
TAIR PP10 AT5G03540.1 -1 2e-18 81 40/57 (70%) | Symbols: ATEXO70A1, EXO70A1 | exocyst subunit exo70 family protein A1 | chr5:889606-893916 FORWARD LENGTH=638