- Predicted Gene MLOC_27830
MLOC_27830 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.4365 | 6.7234 | 6.48571 | 7.08198 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.56798 | 11.1102 | 17.4008 | 8.72598 |
| INF1 | Young developing inflorescences (5mm) | 8.22892 | 9.563 | 14.1737 | 7.52504 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.9282 | 13.7362 | 15.9746 | 13.283 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.025 | 11.9252 | 14.5689 | 13.2621 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.8233 | 20.2399 | 8.1844 | 56.6723 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.88655 | 4.68747 | 4.47943 | 4.02423 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.19801 | 0.659377 | 0.586718 | 1.87489 |
CDS Structure of MLOC_27830
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27830.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g12530.1 |
+2 |
8e-25 |
103 |
48/51 (94%) |
13103.m01434 protein cation efflux family protein, putative, expressed |
| TAIR PP10 |
AT3G58060.1 |
+2 |
1e-24 |
102 |
47/51 (92%) |
Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411 |