MLOC_27817 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8116952.070822.595880
LEAShoots from the seedlings (10 cm shoot stage)6.805991.577141.991810
INF1Young developing inflorescences (5mm)3.037763.560413.782230
INF2Developing inflorescences (1-1.5 cm)12.45674.844515.571660
ROORoots from the seedlings (10 cm shoot stage)2.551551.018170.6390860
NODDeveloping tillers at six leaf stage, 3rd internode1.106321.00980.641890
CAR5Developing grain, bracts removed (5 DPA)2.598131.538011.358570
CAR15Developing grain, bracts removed (15 DPA)1.090011.031471.89970



CDS Structure of MLOC_27817






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366474
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366474NoneNoneNoneNone
MLOC_27817.1NoneAvailableNonecontig_1865293 (Mapped)
MLOC_31158.1NoneAvailableNonecontig_2162393 (Not mapped)
MLOC_33299.1NoneAvailableNonecontig_2361492 (Mapped)
MLOC_35383.1NoneAvailableNonecontig_2479947 (Not mapped)
MLOC_47018.1NoneAvailableNonecontig_299369 (Not mapped)
MLOC_48427.1NoneAvailableAvailablecontig_323524 (Mapped)
MLOC_9685.1NoneAvailableNonecontig_1546237 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----