MLOC_27789 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains262.888110.239116.847186.066
LEAShoots from the seedlings (10 cm shoot stage)52.1797.1518513.922327.2726
INF1Young developing inflorescences (5mm)315.629318.664379.043382.163
INF2Developing inflorescences (1-1.5 cm)241.188356.584320.495477.907
ROORoots from the seedlings (10 cm shoot stage)137.278110.295161.854176.952
NODDeveloping tillers at six leaf stage, 3rd internode2.144625.124518.6079648.4611
CAR5Developing grain, bracts removed (5 DPA)142.384135.505125.181184.259
CAR15Developing grain, bracts removed (15 DPA)10.96058.5644511.753733.6965



CDS Structure of MLOC_27789






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370674
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370674CUST_25478_PI427708080NoneNoneNone
MLOC_10887.1NoneAvailableNonecontig_1559988 (Mapped)
MLOC_27789.1NoneAvailableAvailablecontig_1862817 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----