MLOC_27773 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.629958.475354.07551.0967
LEAShoots from the seedlings (10 cm shoot stage)48.90150.755950.720243.2966
INF1Young developing inflorescences (5mm)110.76112.865103.7684.5621
INF2Developing inflorescences (1-1.5 cm)88.710294.002788.040393.8958
ROORoots from the seedlings (10 cm shoot stage)37.305756.804844.063864.4188
NODDeveloping tillers at six leaf stage, 3rd internode35.519837.982645.6443146.467
CAR5Developing grain, bracts removed (5 DPA)73.106269.084578.187967.6941
CAR15Developing grain, bracts removed (15 DPA)33.359233.449733.263867.3716



CDS Structure of MLOC_27773






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361745
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361745CUST_20419_PI427708080NoneNoneNone
MLOC_27773.1NoneAvailableAvailablecontig_186163 (Mapped)
MLOC_29160.1NoneAvailableNonecontig_1980514 (Not mapped)
MLOC_46578.2NoneAvailableNonecontig_292511 (Not mapped)
MLOC_48688.2NoneAvailableNonecontig_328031 (Mapped)
MLOC_69437.1NoneAvailableNonecontig_56423 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----