MLOC_27727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1592370.3708950.2429660.345919
LEAShoots from the seedlings (10 cm shoot stage)0.2814740.3321510.1689020.229379
INF1Young developing inflorescences (5mm)0.03462930.040613800.039466
INF2Developing inflorescences (1-1.5 cm)0.1521840.07191370.4032550.233285
ROORoots from the seedlings (10 cm shoot stage)1.528211.360091.082711.753
NODDeveloping tillers at six leaf stage, 3rd internode0.4487780.09637960.027120.198439
CAR5Developing grain, bracts removed (5 DPA)0.6628530.7098740.721740.841754
CAR15Developing grain, bracts removed (15 DPA)3.338724.265022.756510.1152



CDS Structure of MLOC_27727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27727.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356803NoneNoneNoneNone
MLOC_27727.1CUST_17980_PI427708080AvailableAvailablecontig_185682 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21650.1 +1 2e-26 104 53/86 (62%) 13103.m02598 protein expressed protein
TAIR PP10None-----