- Predicted Gene MLOC_27639
MLOC_27639 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.459813 | 5.11477 | 2.66342 | 2.88643 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.78975 | 4.86288 | 2.20488 | 2.68219 |
| INF1 | Young developing inflorescences (5mm) | 7.03307 | 6.82566 | 6.99142 | 5.40601 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.40502 | 7.63711 | 4.3286 | 6.99515 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.05306 | 1.35261 | 1.72972 | 1.52243 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.751767 | 0.952835 | 1.6831 | 3.18629 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.50099 | 3.61942 | 2.47305 | 2.49907 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.30393 | 0.569641 | 1.65445 | 2.29805 |
CDS Structure of MLOC_27639
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27639.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g20090.1 |
+3 |
6e-33 |
125 |
55/66 (83%) |
13106.m02146 protein NUP155, putative, expressed |
| TAIR PP10 |
AT1G14850.1 |
+3 |
7e-24 |
99 |
45/73 (62%) |
| Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5123259 REVERSE LENGTH=1464 |