MLOC_27566 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.51359.0300613.344612.3606
LEAShoots from the seedlings (10 cm shoot stage)22.421418.752121.448817.6743
INF1Young developing inflorescences (5mm)26.672633.253736.905631.5498
INF2Developing inflorescences (1-1.5 cm)39.932437.777142.713149.5142
ROORoots from the seedlings (10 cm shoot stage)8.500577.6411911.239510.5938
NODDeveloping tillers at six leaf stage, 3rd internode9.1814223.570221.939264.4789
CAR5Developing grain, bracts removed (5 DPA)33.645432.647533.439637.4707
CAR15Developing grain, bracts removed (15 DPA)18.552516.641518.148446.2103



CDS Structure of MLOC_27566






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250196.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250196.1CUST_18807_PI427708080NoneNoneNone
MLOC_21067.1NoneAvailableNonecontig_159301 (Mapped)
MLOC_25136.1NoneAvailableNonecontig_167309 (Mapped)
MLOC_25589.1NoneAvailableNonecontig_1700802 (Not mapped)
MLOC_27434.1NoneAvailableNonecontig_1831573 (Not mapped)
MLOC_27566.1NoneAvailableAvailablecontig_1843700 (Not mapped)
MLOC_33024.1NoneAvailableNonecontig_2338518 (Not mapped)
MLOC_35679.1NoneAvailableNonecontig_2515418 (Not mapped)
MLOC_46822.1NoneAvailableNonecontig_296243 (Mapped)
MLOC_50983.1NoneAvailableNonecontig_36806 (Mapped)
MLOC_9393.1NoneAvailableNonecontig_1519587 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----