- Predicted Gene MLOC_27545
MLOC_27545 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.4261 | 25.362 | 27.1666 | 28.6792 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.6737 | 22.567 | 13.5106 | 21.6684 |
| INF1 | Young developing inflorescences (5mm) | 16.8582 | 19.5182 | 19.4584 | 16.5598 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.6701 | 15.0655 | 12.9587 | 15.7595 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.3833 | 11.4847 | 10.8728 | 17.4015 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.04668 | 5.35303 | 6.286 | 22.1186 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.6306 | 19.9931 | 23.1063 | 21.9313 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.68815 | 9.55323 | 6.17674 | 21.6828 |
CDS Structure of MLOC_27545
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27545.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g50030.1 |
-3 |
4e-39 |
140 |
66/74 (89%) |
13101.m05207 protein CPuORF25 - conserved peptide uORF-containing transcript, expressed |
| TAIR PP10 |
AT1G48600.1 |
-3 |
2e-33 |
124 |
56/74 (76%) |
| Symbols: PMEAMT, AtPMEAMT | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:17966448-17969077 FORWARD LENGTH=475 |