- Predicted Gene MLOC_27544
MLOC_27544 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 1.77348 | 2.57459 | 2.94764 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 3.19174 | 3.04183 | 4.09863 |
| INF1 | Young developing inflorescences (5mm) | 0 | 3.25777 | 0 | 4.03858 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.35462 | 0 | 2.77361 | 4.12052 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.654139 | 0.913826 | 0.885529 | 3.29949 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.922241 | 0.860996 | 2.72685 | 2.01199 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.748474 | 1.02799 | 4.44285 |
CDS Structure of MLOC_27544
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27544.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g01400.1 |
-2 |
6e-11 |
58 |
24/26 (92%) |
13106.m00042 protein glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed |
| TAIR PP10 |
AT3G48110.1 |
-2 |
9e-11 |
57 |
23/26 (88%) |
| Symbols: EDD1, EDD | glycine-tRNA ligases | chr3:17763111-17770964 FORWARD LENGTH=1067 |