- Predicted Gene MLOC_27504
MLOC_27504 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27504_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27504_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.23101 | 11.8538 | 11.2826 | 12.1791 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.7995 | 4.96996 | 6.72789 | 6.29969 |
INF1 | Young developing inflorescences (5mm) | 18.9101 | 21.1142 | 20.8206 | 19.2984 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.4867 | 23.84 | 27.7895 | 31.2894 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.88259 | 7.2093 | 9.47483 | 8.76709 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.4663 | 17.8538 | 14.3102 | 47.5993 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.0335 | 17.0244 | 16.3413 | 18.1638 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.95722 | 4.59012 | 7.10413 | 15.1899 |
CDS Structure of MLOC_27504
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27504.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g43194.1 |
-2 |
1e-56 |
108 |
54/69 (78%) |
13102.m04795 protein aldehyde dehydrogenase, putative, expressed |
TAIR PP10 |
AT4G36250.1 |
-3 |
3e-41 |
87 |
42/85 (49%) |
| Symbols: ALDH3F1 | aldehyde dehydrogenase 3F1 | chr4:17151029-17153381 FORWARD LENGTH=484 |