- Predicted Gene MLOC_27480
MLOC_27480 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.97039 | 1.82232 | 0.990512 | 2.62757 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0.438563 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.14655 | 0.199628 | 0.354226 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.587301 | 0.515182 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.457354 | 0.202634 | 0.922499 | 2.48727 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.185764 | 0.344752 | 0 | 0.388062 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.198104 | 0 | 0.974723 |
CDS Structure of MLOC_27480
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27480.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g23180.1 |
+3 |
5e-41 |
142 |
72/114 (63%) |
13112.m02355 protein 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed |
| TAIR PP10 |
AT1G09340.1 |
+3 |
2e-38 |
134 |
67/114 (59%) |
| Symbols: CRB, CSP41B, HIP1.3 | chloroplast RNA binding | chr1:3015473-3018035 FORWARD LENGTH=378 |