MLOC_27465 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.909586.891514.915286.15729
LEAShoots from the seedlings (10 cm shoot stage)7.738246.24723.36385.24852
INF1Young developing inflorescences (5mm)6.865617.522468.95277.3056
INF2Developing inflorescences (1-1.5 cm)16.241110.115811.996314.8401
ROORoots from the seedlings (10 cm shoot stage)5.545157.513235.912079.66137
NODDeveloping tillers at six leaf stage, 3rd internode2.254171.727782.537365.67694
CAR5Developing grain, bracts removed (5 DPA)2.49862.097661.768492.26655
CAR15Developing grain, bracts removed (15 DPA)3.036342.037272.747626.77331



CDS Structure of MLOC_27465






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27465.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27465.1CUST_11918_PI427708083AvailableAvailablecontig_1834264 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g31900.1 -3 1e-14 76 36/46 (78%) 13104.m03048 protein calmodulin-binding transcription activator 4, putative, expressed
TAIR PP10None-----