MLOC_27425 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.019682.697226.539310
LEAShoots from the seedlings (10 cm shoot stage)2.765853.957054.475660
INF1Young developing inflorescences (5mm)3.889331.040472.551720
INF2Developing inflorescences (1-1.5 cm)3.807971.197052.746580
ROORoots from the seedlings (10 cm shoot stage)8.321510.5816641.721850
NODDeveloping tillers at six leaf stage, 3rd internode0.4575295.25425.840450
CAR5Developing grain, bracts removed (5 DPA)2.65856.124423.923480
CAR15Developing grain, bracts removed (15 DPA)1.063722.837443.269820



CDS Structure of MLOC_27425






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356416
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356416CUST_23903_PI427708080NoneNoneNone
MLOC_27425.1NoneAvailableNonecontig_183088 (Mapped)
MLOC_55117.1NoneAvailableNonecontig_396766 (Not mapped)
MLOC_69283.1NoneAvailableAvailablecontig_56196 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----