MLOC_27416 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.867739.026838.62950
LEAShoots from the seedlings (10 cm shoot stage)18.238516.003418.53910
INF1Young developing inflorescences (5mm)22.584527.605559.55020
INF2Developing inflorescences (1-1.5 cm)35.786928.184146.52150
ROORoots from the seedlings (10 cm shoot stage)23.641932.442920.69620
NODDeveloping tillers at six leaf stage, 3rd internode16.372433.439719.44470
CAR5Developing grain, bracts removed (5 DPA)29.788623.937225.50250
CAR15Developing grain, bracts removed (15 DPA)11.78646.105545.245840



CDS Structure of MLOC_27416






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249926.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249926.1CUST_18759_PI427708080NoneNoneNone
MLOC_27416.1NoneAvailableNonecontig_183 (Not mapped)
MLOC_43568.3NoneAvailableNonecontig_271364 (Mapped)
MLOC_72723.1NoneAvailableAvailablecontig_62217 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----