MLOC_27403 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.515211.604294.600260
LEAShoots from the seedlings (10 cm shoot stage)1.933781.991297.253140
INF1Young developing inflorescences (5mm)6.298874.6886.135920
INF2Developing inflorescences (1-1.5 cm)4.31795.29574.357260
ROORoots from the seedlings (10 cm shoot stage)5.072683.284743.494080
NODDeveloping tillers at six leaf stage, 3rd internode1.904713.042413.932180
CAR5Developing grain, bracts removed (5 DPA)2.23243.358192.478680
CAR15Developing grain, bracts removed (15 DPA)0.2613710.8161240.7654710



CDS Structure of MLOC_27403






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373728
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373728CUST_22542_PI427708080NoneNoneNone
MLOC_27403.1NoneAvailableNonecontig_18286 (Mapped)
MLOC_30829.1NoneAvailableNonecontig_213072 (Mapped)
MLOC_35552.1NoneAvailableNonecontig_249981 (Mapped)
MLOC_43005.1NoneAvailableAvailablecontig_267135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----