- Predicted Gene MLOC_27392
MLOC_27392 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.494741 | 0 | 0.933511 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.271939 | 0.236309 |
| INF1 | Young developing inflorescences (5mm) | 0.140593 | 0 | 0.711886 | 0.361772 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.142238 | 0.253151 | 0.334454 | 0.455928 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.121422 | 0.288371 | 0.200407 | 0.90976 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.164013 | 0 | 0.164462 | 0.20244 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.128138 | 0 | 0 | 0.462198 |
CDS Structure of MLOC_27392
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27392.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g01290.2 |
-1 |
1e-19 |
85 |
39/56 (70%) |
13109.m00035 protein hhH-GPD superfamily base excision DNA repair protein, putative, expressed |
| TAIR PP10 | None | - | - | - | - | - |