MLOC_27365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.04836010.0711707
CAR5Developing grain, bracts removed (5 DPA)196.847245.11205.423161.057
CAR15Developing grain, bracts removed (15 DPA)9.656618.6058810.817815.8129



CDS Structure of MLOC_27365






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375981NoneNoneNoneNone
MLOC_27365.1CUST_173_PI427708083AvailableAvailablecontig_182546 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g13480.1 -2 9e-22 91 48/82 (59%) 13104.m01238 protein response regulator receiver domain containing protein, expressed
TAIR PP10None-----