- Predicted Gene MLOC_27353
MLOC_27353 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27353_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27353_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.50363 | 7.94575 | 9.09533 | 7.6325 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.1054 | 10.5446 | 12.4046 | 8.72356 |
INF1 | Young developing inflorescences (5mm) | 8.25694 | 9.08709 | 12.4008 | 7.08675 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.7813 | 12.6988 | 12.7224 | 13.6901 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.7076 | 9.4902 | 6.883 | 10.252 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.43083 | 13.8127 | 11.387 | 37.1332 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.47762 | 10.7975 | 10.8159 | 9.23366 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.93564 | 4.30131 | 4.4083 | 8.63181 |
CDS Structure of MLOC_27353
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27353.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g37520.1 |
+3 |
3e-39 |
143 |
71/73 (97%) |
13111.m03672 protein BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed |
TAIR PP10 |
AT4G02680.1 |
+3 |
2e-34 |
129 |
61/73 (84%) |
| Symbols: EOL1 | ETO1-like 1 | chr4:1181202-1184328 REVERSE LENGTH=888 |