- Predicted Gene MLOC_27335
MLOC_27335 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27335_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27335_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0613435 | 0 | 0 | 0.0491152 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.247979 | 0.0911937 | 0.181033 | 0.164988 |
INF1 | Young developing inflorescences (5mm) | 0.128783 | 0.189406 | 0.0555764 | 0.150157 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0826578 | 0.315411 | 0.271779 | 0.304239 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.223739 | 0.117766 | 0 | 0.249861 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0401251 | 0.196828 | 0.0510784 | 0.572222 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0936413 | 0.0519112 | 0.100236 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.133307 | 0.0488387 | 0.132251 | 0.272326 |
CDS Structure of MLOC_27335
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27335.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g43150.1 |
-2 |
1e-20 |
94 |
50/84 (60%) |
13106.m04516 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |