MLOC_27335 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0613435000.0491152
LEAShoots from the seedlings (10 cm shoot stage)0.2479790.09119370.1810330.164988
INF1Young developing inflorescences (5mm)0.1287830.1894060.05557640.150157
INF2Developing inflorescences (1-1.5 cm)0.08265780.3154110.2717790.304239
ROORoots from the seedlings (10 cm shoot stage)0.2237390.11776600.249861
NODDeveloping tillers at six leaf stage, 3rd internode0.04012510.1968280.05107840.572222
CAR5Developing grain, bracts removed (5 DPA)00.09364130.05191120.100236
CAR15Developing grain, bracts removed (15 DPA)0.1333070.04883870.1322510.272326



CDS Structure of MLOC_27335






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27335.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27335.1NoneAvailableAvailablecontig_182343 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43150.1 -2 1e-20 94 50/84 (60%) 13106.m04516 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----