MLOC_27319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.115311.295711.029512.3108
LEAShoots from the seedlings (10 cm shoot stage)7.635443.609974.776755.32344
INF1Young developing inflorescences (5mm)16.862920.075120.802816.919
INF2Developing inflorescences (1-1.5 cm)19.005625.514423.060326.3178
ROORoots from the seedlings (10 cm shoot stage)5.501228.890016.492711.1021
NODDeveloping tillers at six leaf stage, 3rd internode6.761167.208659.5423427.4906
CAR5Developing grain, bracts removed (5 DPA)8.5982510.282710.426410.2936
CAR15Developing grain, bracts removed (15 DPA)5.538764.75974.5282112.1214



CDS Structure of MLOC_27319






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363145
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363145CUST_24613_PI427708080NoneNoneNone
MLOC_27319.1NoneAvailableAvailablecontig_182177 (Not mapped)
MLOC_35937.1NoneAvailableNonecontig_2526595 (Not mapped)
MLOC_47152.1NoneAvailableNonecontig_301569 (Not mapped)
MLOC_48846.1NoneAvailableNonecontig_330764 (Not mapped)
MLOC_54238.1NoneAvailableNonecontig_389865 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----