MLOC_27318 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4497560.1675090.3907060.344982
LEAShoots from the seedlings (10 cm shoot stage)00.4557340.2432490.222706
INF1Young developing inflorescences (5mm)0.4698490.4447010.4290770.452535
INF2Developing inflorescences (1-1.5 cm)0.4838680.8550710.534880.754573
ROORoots from the seedlings (10 cm shoot stage)0.04377420.2480440.1231850.257594
NODDeveloping tillers at six leaf stage, 3rd internode0.8508391.433680.5435823.15048
CAR5Developing grain, bracts removed (5 DPA)0.2888950.530140.1821740.416925
CAR15Developing grain, bracts removed (15 DPA)0.1944260.1360810.1189560.459738



CDS Structure of MLOC_27318






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27318.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27318.1CUST_10462_PI427708080AvailableAvailablecontig_182159 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53730.1 -1 5e-106 334 168/198 (85%) 13103.m05874 protein flavoprotein wrbA, putative, expressed
TAIR PP10 AT4G36750.1 -1 4e-75 250 130/193 (67%) Quinone reductase family protein | chr4:17324642-17326215 FORWARD LENGTH=273