MLOC_27284 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.564789.50527.579510
LEAShoots from the seedlings (10 cm shoot stage)6.994456.007116.539650
INF1Young developing inflorescences (5mm)5.20876.398084.944360
INF2Developing inflorescences (1-1.5 cm)4.653715.599763.441120
ROORoots from the seedlings (10 cm shoot stage)6.144616.842533.918290
NODDeveloping tillers at six leaf stage, 3rd internode2.142364.050152.298970
CAR5Developing grain, bracts removed (5 DPA)20.077717.978413.53330
CAR15Developing grain, bracts removed (15 DPA)1.269511.146871.401130



CDS Structure of MLOC_27284






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357530
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357530CUST_19827_PI427708080NoneNoneNone
MLOC_22371.1NoneAvailableNonecontig_160601 (Mapped)
MLOC_27284.1NoneAvailableNonecontig_181902 (Mapped)
MLOC_31741.1NoneAvailableNonecontig_2218529 (Not mapped)
MLOC_33545.1NoneAvailableNonecontig_23837 (Not mapped)
MLOC_48974.1NoneAvailableNonecontig_33301 (Not mapped)
MLOC_5639.2NoneAvailableAvailablecontig_136489 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----