MLOC_27266 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.9519511.08687.82318.94467
LEAShoots from the seedlings (10 cm shoot stage)3.027081.545384.04252.48593
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.6651011.226160.9076771.04339
ROORoots from the seedlings (10 cm shoot stage)4.980033.69015.748944.94725
NODDeveloping tillers at six leaf stage, 3rd internode00.4285560.7611492.34163
CAR5Developing grain, bracts removed (5 DPA)7.038997.900143.726795.85658
CAR15Developing grain, bracts removed (15 DPA)2.443661.73882.50044.84576



CDS Structure of MLOC_27266






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_27266.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_27266.1NoneAvailableAvailablecontig_181802 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g02380.2 -3 8e-19 81 40/51 (78%) 13106.m00160 protein T-complex protein, putative, expressed
TAIR PP10 AT5G56500.2 -3 6e-20 83 41/51 (80%) TCP-1/cpn60 chaperonin family protein | chr5:22874058-22876966 FORWARD LENGTH=597