MLOC_2725 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.258781.603191.753791.61621
LEAShoots from the seedlings (10 cm shoot stage)3.370283.312053.16252.40516
INF1Young developing inflorescences (5mm)1.30371.827122.102281.1944
INF2Developing inflorescences (1-1.5 cm)2.00492.345151.826291.92525
ROORoots from the seedlings (10 cm shoot stage)1.492321.396891.944211.53902
NODDeveloping tillers at six leaf stage, 3rd internode1.499981.403952.774134.28617
CAR5Developing grain, bracts removed (5 DPA)1.507821.641721.988141.37877
CAR15Developing grain, bracts removed (15 DPA)2.962332.769041.785165.09883



CDS Structure of MLOC_2725






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2725.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2725.1CUST_10453_PI427708080AvailableAvailablecontig_124340 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57510.2 +1 5e-102 329 155/184 (84%) 13104.m06021 protein exostosin family domain containing protein, expressed
TAIR PP10 AT1G34270.1 +1 4e-80 275 124/183 (68%) Exostosin family protein | chr1:12492571-12494514 REVERSE LENGTH=477