MLOC_27249 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.30538200
LEAShoots from the seedlings (10 cm shoot stage)00.57283800
INF1Young developing inflorescences (5mm)0.6509650.9589720.4067370
INF2Developing inflorescences (1-1.5 cm)1.4861.117540.6726260
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.3012470.3088130.09548970
CAR5Developing grain, bracts removed (5 DPA)0.6241991.120130.3464540
CAR15Developing grain, bracts removed (15 DPA)1.003990.3401800



CDS Structure of MLOC_27249






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK375595
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375595NoneNoneNoneNone
MLOC_25955.1NoneAvailableNonecontig_1724250 (Not mapped)
MLOC_26084.1NoneAvailableNonecontig_1734180 (Not mapped)
MLOC_27249.1NoneAvailableNonecontig_1816770 (Not mapped)
MLOC_27778.1NoneAvailableNonecontig_1862097 (Not mapped)
MLOC_29259.1NoneAvailableNonecontig_1988447 (Not mapped)
MLOC_30532.1NoneAvailableNonecontig_2105795 (Not mapped)
MLOC_30962.1NoneAvailableNonecontig_2143837 (Not mapped)
MLOC_35046.1NoneAvailableNonecontig_2454064 (Not mapped)
MLOC_362.1NoneAvailableNonecontig_1025514 (Not mapped)
MLOC_42577.1NoneAvailableNonecontig_265229 (Mapped)
MLOC_42770.1NoneAvailableNonecontig_2661814 (Not mapped)
MLOC_42787.1NoneAvailableNonecontig_2662653 (Not mapped)
MLOC_509.1NoneAvailableNonecontig_1035800 (Not mapped)
MLOC_51947.1NoneAvailableAvailablecontig_371749 (Mapped)
MLOC_58986.1NoneAvailableNonecontig_431788 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----