- Predicted Gene MLOC_27244
MLOC_27244 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_27244_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_27244_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 37.4037 | 19.532 | 21.8617 | 27.0082 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.823 | 4.13581 | 8.99583 | 9.23685 |
INF1 | Young developing inflorescences (5mm) | 66.3429 | 67.8775 | 59.8036 | 59.1507 |
INF2 | Developing inflorescences (1-1.5 cm) | 47.8305 | 75.75 | 80.7722 | 76.7281 |
ROO | Roots from the seedlings (10 cm shoot stage) | 35.8757 | 30.7223 | 27.0542 | 36.8469 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.03714 | 5.79861 | 10.1567 | 24.5917 |
CAR5 | Developing grain, bracts removed (5 DPA) | 38.1034 | 38.5534 | 40.3763 | 40.4213 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.28741 | 8.73994 | 11.3099 | 22.4992 |
CDS Structure of MLOC_27244
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_27244.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g38300.1 |
+1 |
4e-34 |
124 |
64/64 (100%) |
13108.m04061 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G22880.1 |
+1 |
3e-33 |
121 |
61/64 (95%) |
| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145 |